Autumn 2009: Topics in
Bioinformatics and Computational Biology
Schedule: Tuesday &
Thursday
Below is a temporary list of
topics that I would like to cover.
However, I will change some
topics and schedules according to our progress.
|
Date |
Topic |
Lecturer |
Lecture Notes |
|
Sep
29 (T) |
Organization
and Course Introduction |
Jinbo
Xu |
|
|
Oct
1 (Th) |
Introduction
to computational molecular biology |
Jinbo
Xu |
|
|
Oct
6 (T) |
Travel |
|
|
|
Oct
8 (Th) |
|
|
|
|
Oct
13 (T) |
Homology
search: BLAST |
|
|
|
Oct
15 (Th) |
Alignment
score and statistical significance |
|
|
|
Oct
20 (T) |
Homology
search: PatternHunter |
|
|
|
Oct
22 (Th) |
Homology
search: PatternHunter |
|
|
|
Oct
27 (T) |
Motif discovery |
|
|
|
Oct
29 (Th) |
Multiple
sequence alignment |
|
|
|
Nov
3 (T) |
RNA
2nd and 3rd structure prediction |
Zhiyong
Wang |
|
|
Nov
5 (Th) |
RNA
2nd and 3rd structure prediction |
Zhiyong
Wang |
|
|
Nov
10 (T) |
Protein
structure comparison/alignment |
|
|
|
Nov
12 (Th) |
Protein
structure comparison/alignment |
|
|
|
Nov
17 (T) |
Protein
secondary structure prediction |
Zhiyong
Wang |
|
|
Nov
19 (Th) |
Protein
structure prediction (template-based modeling) |
Jian
Peng |
|
|
Nov
24 (T) |
Protein
structure prediction (template-based modeling) |
Jian
Peng |
|
|
Nov
26 (Th) |
Thanksgiving |
|
|
|
Dec
1 (T) |
Protein
structure prediction (template-free modeling) |
Feng
Zhao (Rm 501) |
|
|
Dec
3 (Th) |
Protein
structure prediction (template-free modeling) |
Feng
Zhao |
|
|
Dec
8 (T) |
End |
|
|