Note:

We have stopped supporting the RAPTOR server temporarily due to limited computing power. However, we are releasing a totally new threading method BoostThreader, which can be downloaded at http://ttic.uchicago.edu/~jinbo/BoostThreader/BoostThreader.tar.gz. Please note that this is only a trial version but not an official release. Please feel free to run it and we appreciate your feedback about this new program. To run BoostThreader, you also need PSI-BLAST, HHpred and SSpro/ACCpro.

RAPTOR Server for Protein Structure Prediction

(Version 2.0)

RAPTOR is one of the best protein structure prediction servers. It performs very well in recent CASPs (Third Critical Assessment of Structure. For papers describing RAPTOR, please go to my research page.

RAPTOR can run as a server or a standalone application on Windows, Linux, Solaris, IRIX, HP-UX, OSF, and Mac OS. RAPTOR can also run on a SMP machine, a cluster system and a massively parallel processing platform.

A new web interface for RAPTOR is available at new RAPTOR server or new RAPTOR server at BSI . For a trial version or a commercial version of RAPTOR and its documents, please visit BSI (Bioinformatics Solutions Inc.).

Attention: If you want to submit your sequences to RAPTOR, please contact with j3xu@tti-c.org first. In addition, the template database is not updated frequently, which might impact the fold recognition rate. 

Sequence Label:	Output Format:CASP AL PIR
Sequence:
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