Invited Talks

Protein threading by nonlinearly combining evolutionary and non-evolutionary information. The University of Minnesota, April 2009.

Protein threading by nonlinearly combining evolutionary and non-evolutionary information. MIT, March 2009.

Computer Algorithms for Structural Bioinformatics. INFORMS Annual Meeting, October 2008.

Computer Algorithms for Structural Bioinformatics. SIAM on Discrete Mathematics, June 2008.

Global Alignment of Multiple Protein Interaction Networks. UIC, April 2008.

Protein Conformation Sampling Using Conditional Random Fields. MIT, Feb 2008.

Knowledge-Based Protein Structure Prediction. TTI-Japan, April 2007.

Knowledge-Based Protein Structure Prediction. Inst of Comp Tech, Chinese Academy of Sciences, March 2007.

Knowledge-Based Protein Structure Prediction. Tsinghua University, March 2007.

A Parameterized Algorithm for Protein Structure Alignment. Waterloo, July 2006.

A Parameterized Algorithm for Protein Structure Alignment. MIT, May 2006.

Protein Structure Prediction. Northwestern University, May 2006.

A Parameterized Algorithm for Protein Structure Alignment. UIC, November 2005.

Protein Side-Chain Packing. Boston University, October, 2005.

Fast and Accurate Protein Side-Chain Prediction. DIMACS Workshop on Information Processing by Protein Structures in Molecular Recognition, DIMACS Center, CoRE Building, Rutgers University, June 13-14, 2005.

RAPTOR: protein threading by linear programming. SIAM minisymposium, SIAM Conference on Control and Its Applications. New Orleans, LA, July 11-14,2005.

ACE: consensus method to fold recognition. CASP6, Italy. Dec, 2004. (An invitation to our ACE group)

Protein Structure Prediction by Linear Programming. School of Medicine, University of Western Ontario, Oct, 2004.

Protein Structure Prediction. ICTS, University of Waterloo, 2003.